The detailed information of tRNA gene sequence


Sequence ID>WENV170780533
Genome IDMAAB01004756
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 6082
End posion on genome 6172
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gctccacaac
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGTTTAATGCACCAGTCTTGAAAACTGGCGTAGGTTTATAGCCT
ACCGAGAGTTCGAATCTCTCCTCCTCCGCCA
Downstream region at tRNA end position 
ttattcatta
Secondary structure (Cloverleaf model)
>WENV170780533	Ser	TGA
                   c      GCCA ttattcatta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G         | | |                 T T
    T       A T G C
      T T A        A     CGTAGGTTTATAGCCTACC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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