The detailed information of tRNA gene sequence


Sequence ID>WENV170781181
Genome IDMAAB01029622
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 26585
End posion on genome 26674
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaataatt
tRNA gene sequence 
GGTGAGCTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTTATCCCTA
ACGAGAGTTCGAATCTCTCGCTCACCGCCA
Downstream region at tRNA end position 
tattatggtc
Secondary structure (Cloverleaf model)
>WENV170781181	Ser	GGA
                   t      GCCA tattatggtc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTTATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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