The detailed information of tRNA gene sequence


Sequence ID>CA_fS100004
Genome IDAE017199
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeum equitans Kin4-M [AE017199]
Start position on genome 308963
End posion on genome 380364
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCCGGTAGCTCAGCCTGGTTAGAGCGGCGGTGGCCATCAACCCGCAGGTCCGGGGTTC
GAATCCCCGCCGGCCCnnnn
Downstream region at tRNA end position 
nnnnnn-
Secondary structure (Cloverleaf model)
>CA_fS100004	Trp	CCA
                   n      nnnn nnnnnn-
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       C G G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     GCAGGTC
                    G - C
                    C   C
                    G - C
                    G   A
                    T - A
                  G       C *
                  G       T
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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