The detailed information of tRNA gene sequence


Sequence ID>CA_fS100005
Genome IDAE017199
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeum equitans Kin4-M [AE017199]
Start position on genome 3254
End posion on genome 35287
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
CGCGGGGTGGGGCAGCCTGGAGTGCCCGGGGGGCTCATAACCCCCAGGTCCCCGGTTCAA
ATCCGGGCCCCGCGTnnn
Downstream region at tRNA end position 
nnnnnnn
Secondary structure (Cloverleaf model)
>CA_fS100005	Met	CAT
                   n      Tnnn nnnnnnn
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G G C C     A
    C C G A        G      | | | | |     A
  T         C G G G       C C C G G     C
  G         | | | |                 T T
  G         G C C C
    A G T          G     AGGTC
                    G - C
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C*A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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