The detailed information of tRNA gene sequence


Sequence ID>WENV170781719
Genome IDMAAB01042121
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 17105
End posion on genome 17018
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtgatatta
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGCGTGTAAACCGCAAGGTTTC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tttattttta
Secondary structure (Cloverleaf model)
>WENV170781719	Ser	GGA
                   a      GCCA tttattttta
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAACCGCAAGGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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