The detailed information of tRNA gene sequence


Sequence ID>WENV170781900
Genome IDMAAC01003935
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 3308
End posion on genome 3221
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaagcattac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTATACCGCAAGGTATC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
taaataaacc
Secondary structure (Cloverleaf model)
>WENV170781900	Ser	GGA
                   c      GCCA taaataaacc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATACCGCAAGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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