The detailed information of tRNA gene sequence


Sequence ID>WENV170782537
Genome IDMAAC01010181
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 41596
End posion on genome 41507
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaataatt
tRNA gene sequence 
GGTGAGCTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTTATCCCTA
ACGAGAGTTCGAATCTCTCGCTCACCGCCA
Downstream region at tRNA end position 
tattatggtc
Secondary structure (Cloverleaf model)
>WENV170782537	Ser	GGA
                   t      GCCA tattatggtc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTTATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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