The detailed information of tRNA gene sequence


Sequence ID>WENV170784305
Genome IDMCHG01000666
Search identical group
Phylum/Class[MCHG] permafrost metagenome; enrichment culture inoculated with soil; incubated with H2/CO2 at 20 degrees celsius and
Species
Start position on genome 5844
End posion on genome 5769
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttcattcct
tRNA gene sequence 
AGGGTGGTGGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCCGCCCTGCAA
Downstream region at tRNA end position 
gtcggtggta
Secondary structure (Cloverleaf model)
>WENV170784305	Trp	CCA
                   t      GCAA gtcggtggta
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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