The detailed information of tRNA gene sequence


Sequence ID>WENV170784494
Genome IDMCND01001393
Search identical group
Phylum/Class[MCND] bioreactor metagenome; activated sludge enriched with benzalkonium chloride
Species
Start position on genome 2158
End posion on genome 2083
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
attttgttat
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTGGCTCCACCA
Downstream region at tRNA end position 
taaactgctt
Secondary structure (Cloverleaf model)
>WENV170784494	Ala	TGC
                   t      ACCA taaactgctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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