The detailed information of tRNA gene sequence


Sequence ID>W09102758
Genome IDAAIG01000011
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia sp. CCS1 [AAIG]
Start position on genome 2656
End posion on genome 2581
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ccgtgccagc
tRNA gene sequence 
GGGTCGTTAGCTCAGTTGGTAGAGCGCTTCGTTTACACCGAAGATGTCGGGAGTTCGAGC
CTCTCACGACCCACCA
Downstream region at tRNA end position 
ttccctatat
Secondary structure (Cloverleaf model)
>W09102758	Val	TAC
                   c      ACCA ttccctatat
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          C G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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