The detailed information of tRNA gene sequence


Sequence ID>W09102952
Genome IDAAIP01000006
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingopyxis alaskensis RB2256 [AAIP]
Start position on genome 89665
End posion on genome 89590
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttcccttcgg
tRNA gene sequence 
GGGCGCTTAGCTCAGCTGGTAGAGCATCTCGTTTACACCGAGAGGGTCGGCGGTTCGAGC
CCGTCAGCGCCCACCA
Downstream region at tRNA end position 
tcatccgaca
Secondary structure (Cloverleaf model)
>W09102952	Val	TAC
                   g      ACCA tcatccgaca
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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