The detailed information of tRNA gene sequence


Sequence ID>WENV170814650
Genome IDMDSW01220668
Search identical group
Phylum/Class[MDSW] marine metagenome; seawater
Species
Start position on genome 2299
End posion on genome 2386
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgtcacct
tRNA gene sequence 
GGAGCGGTGACCGAGAGGCCGAAGGTGCACGATTGGAAATCGTGTGTACCGCAAGGTACC
GAGGGTTCGAATCCCTCTCGCTCCGCCA
Downstream region at tRNA end position 
ttcgcatttt
Secondary structure (Cloverleaf model)
>WENV170814650	Ser	GGA
                   t      GCCA ttcgcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTACCGCAAGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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