The detailed information of tRNA gene sequence


Sequence ID>WENV170829065
Genome IDMDSZ01002434
Search identical group
Phylum/Class[MDSZ] marine metagenome; seawater
Species
Start position on genome 3265
End posion on genome 3179
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnttcttg
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCAGCACTGGAAATGCTGTATAGGGGCAACTTTA
TCGAGGGTTCGAATCCCTCTCTCTCCGttc
Downstream region at tRNA end position 
tattctaata
Secondary structure (Cloverleaf model)
>WENV170829065	Ser	GGA
                   g      Gttc tattctaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATAGGGGCAACTTTATC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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