The detailed information of tRNA gene sequence


Sequence ID>W09109126
Genome IDABTW01000004
Search identical group
Phylum/ClassMyxococcota
SpeciesHaliangium ochraceum DSM 14365 [ABTW]
Start position on genome 288513
End posion on genome 288589
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctttccctc
tRNA gene sequence 
GGGCGATTAACTCAGTTGGTTAGAGTGCCATCTTCACACGGTGGAAGTCACTGGTTCGAG
TCCAGTATCGCCCACTA
Downstream region at tRNA end position 
gagattccgc
Secondary structure (Cloverleaf model)
>W09109126	Val	CAC
                   c      ACTA gagattccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C A       A C T G G     C
    G       | | | |                 T T
    G       G A G T
      T T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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