The detailed information of tRNA gene sequence


Sequence ID>W09112217
Genome IDABXR01000011
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga piezophila KA3 [ABXR]
Start position on genome 76366
End posion on genome 76292
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tcaatgcggt
tRNA gene sequence 
GGGAGCGTAGCTCAGGGGGAGAGCGCCTGCCTTACAAGCAGGAGGTCGTAGGTTCAAGTC
CTGCCGCTCCCACCA
Downstream region at tRNA end position 
gagatgttag
Secondary structure (Cloverleaf model)
>W09112217	Val	TAC
                   t      ACCA gagatgttag
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
        G A        A      | + | | |     A
      G     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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