The detailed information of tRNA gene sequence


Sequence ID>WENV170965697
Genome IDMTEV01000581
Search identical group
Phylum/Class[MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine
Species
Start position on genome 1140
End posion on genome 1048
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcctagagct
tRNA gene sequence 
GGAGACGTGGCCGAGAGGTTGAAGGTACTCCCCTGCTAAGGGAGCATACGGCTTATACCC
GTATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gctggaatta
Secondary structure (Cloverleaf model)
>WENV170965697	Ser	GCT
                   t      GCCA gctggaatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    T       A G G T
      T G A        A     CATACGGCTTATACCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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