The detailed information of tRNA gene sequence


Sequence ID>WENV170965970
Genome IDMTEV01011115
Search identical group
Phylum/Class[MTEV] soil metagenome; soil bioaugmentation with soil previously exposed to atrazine
Species
Start position on genome 1919
End posion on genome 2012
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcaagtttg
tRNA gene sequence 
GGAGACGTGGCCGAGAGGTCGAAGGCACTCCCCTGCTAAGGGAGCATCCGGGCCAAAACC
TGGATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
gtacatcggt
Secondary structure (Cloverleaf model)
>WENV170965970	Ser	GCT
                   g      GCCA gtacatcggt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     CATCCGGGCCAAAACCTGGATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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