The detailed information of tRNA gene sequence


Sequence ID>WENV170966957
Genome IDMTKW01000030
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 300427
End posion on genome 300353
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gcatccgacT
tRNA gene sequence 
GGGGATGTAGCTTAGTTGGGAGAGCGCCGCCTTTGCAAGGCGGAGGTCGTGGGTTCGAAT
CCCATCATCTCCATta
Downstream region at tRNA end position 
ctgggcttga
Secondary structure (Cloverleaf model)
>WENV170966957	Ala	TGC
                   T      ATta ctgggcttga
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       T T C G       G T G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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