The detailed information of tRNA gene sequence


Sequence ID>WENV170967063
Genome IDMTKW01000176
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1030777
End posion on genome 1030703
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattcctcga
tRNA gene sequence 
TGCGGGGTAGAGCAGTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCCTTGGTTCGAATC
CAAGCCCCGCTATCA
Downstream region at tRNA end position 
aaaaagacca
Secondary structure (Cloverleaf model)
>WENV170967063	Met	CAT
                   a      ATCA aaaaagacca
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G A A C C     A
        G A        A      | | | | |     G
      T     C G A G       C T T G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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