The detailed information of tRNA gene sequence


Sequence ID>WENV170967216
Genome IDMTKW01000515
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 72009
End posion on genome 72101
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaagaagggt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaataacag
Secondary structure (Cloverleaf model)
>WENV170967216	Ser	CGA
                   t      GCCA aaaataacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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