The detailed information of tRNA gene sequence


Sequence ID>WENV170967227
Genome IDMTKW01000525
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 122896
End posion on genome 122972
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
gcggtaattt
tRNA gene sequence
GCGCTTGTAGCTCAGTTGGATAGAGCAACGGACTTCTAATCCGTAGGTCGCGGGTTCGAA
TCCTGCCAAGCGCGCCA
Downstream region at tRNA end position
tcgtcccttt
Secondary structure (Cloverleaf model)
>WENV170967227	Arg	TCT
                   t      GCCA tcgtcccttt
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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