The detailed information of tRNA gene sequence


Sequence ID>WENV170967548
Genome IDMTKW01002017
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3979
End posion on genome 3902
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aattgcgcgt
tRNA gene sequence 
CGGGGCGTAGCGTAGTTTGGTTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttttatttgc
Secondary structure (Cloverleaf model)
>WENV170967548	Pro	TGG
                   t      ACCA ttttatttgc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         T G C G       G G A G G     C
  G         + | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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