The detailed information of tRNA gene sequence


Sequence ID>WENV170967622
Genome IDMTKW01002460
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 36336
End posion on genome 36260
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catttatttt
tRNA gene sequence 
GGGCCTTTAGCTCAGCTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
atcccaaaaa
Secondary structure (Cloverleaf model)
>WENV170967622	Met	CAT
                   t      ACCA atcccaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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