The detailed information of tRNA gene sequence


Sequence ID>WENV170967707
Genome IDMTKW01002940
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1532
End posion on genome 1620
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
catacaatcc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTAGGGTGCAAGCCCA
CGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aattcgcacc
Secondary structure (Cloverleaf model)
>WENV170967707	Ser	TGA
                   c      GCCA aattcgcacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | + | | |     G
  G         A G C C       G G G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGGTGCAAGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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