The detailed information of tRNA gene sequence


Sequence ID>WENV170967824
Genome IDMTKW01003679
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 36230
End posion on genome 36318
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgaaaaagat
tRNA gene sequence 
GGAGGGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTAGGGTGCAAGCCCA
CGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tagaaaagtg
Secondary structure (Cloverleaf model)
>WENV170967824	Ser	TGA
                   t      GCCA tagaaaagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G T G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGGTGCAAGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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