The detailed information of tRNA gene sequence


Sequence ID>WENV170968159
Genome IDMTKW01006844
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 44133
End posion on genome 44209
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atatacacat
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGCTAGAGCATACGGTTCATACCCGTAGTGTCAGCGGTTCAAA
TCCGTTCGCCGCTACCA
Downstream region at tRNA end position 
tttttttatt
Secondary structure (Cloverleaf model)
>WENV170968159	Met	CAT
                   t      ACCA tttttttatt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T G C C     A
      T G A        A      | + | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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