The detailed information of tRNA gene sequence


Sequence ID>WENV170968178
Genome IDMTKW01006886
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 916
End posion on genome 840
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttgcatttt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTAGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tcaaatatac
Secondary structure (Cloverleaf model)
>WENV170968178	Met	CAT
                   t      ACCA tcaaatatac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TAGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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