The detailed information of tRNA gene sequence


Sequence ID>WENV170968913
Genome IDMTKW01016677
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 313
End posion on genome 225
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctcgctcgag
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCCGAAAGGGGC
CGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cgaagacaac
Secondary structure (Cloverleaf model)
>WENV170968913	Ser	TGA
                   g      GCCA cgaagacaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTCCGAAAGGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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