The detailed information of tRNA gene sequence


Sequence ID>WENV170969108
Genome IDMTKW01020557
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13457
End posion on genome 13533
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttctttgg
tRNA gene sequence 
GGGCCTTTAGCTCAGCTGGTTAGAGCAACCGGCTCATAACCGGTCGGTCCGGGGTTCGAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
ttagcccaga
Secondary structure (Cloverleaf model)
>WENV170969108	Met	CAT
                   g      ACCA ttagcccaga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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