The detailed information of tRNA gene sequence


Sequence ID>WENV170969506
Genome IDMTKW01030541
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5998
End posion on genome 6087
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcctttcagt
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTGAAGGAGGCGGTCTTGAAAACCGTTGAACCTTTGCGGGTT
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
ttaaacacct
Secondary structure (Cloverleaf model)
>WENV170969506	Ser	TGA
                   t      GCCA ttaaacacct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGAACCTTTGCGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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