The detailed information of tRNA gene sequence


Sequence ID>WENV170969636
Genome IDMTKW01035206
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 123
End posion on genome 199
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aataatattt
tRNA gene sequence 
GGCCCAGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGAGGGTTCGAG
TCCCTTCTGGGTCGCCA
Downstream region at tRNA end position 
ttttattata
Secondary structure (Cloverleaf model)
>WENV170969636	Asp	GTC
                   t      GCCA ttttattata
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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