The detailed information of tRNA gene sequence


Sequence ID>WENV170969892
Genome IDMTKW01043398
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1303
End posion on genome 1376
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
caaaactttt
tRNA gene sequence 
GCGGAAATAGCTCAGTTGGTAGAGCATAACCTTGCCAAGGTTAGGGTCGCGGGTTCGAGT
CCCGTTTTCCGCTCat
Downstream region at tRNA end position 
tgcaaaaatn
Secondary structure (Cloverleaf model)
>WENV170969892	Gly	GCC
                   t      TCat tgcaaaaatn
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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