The detailed information of tRNA gene sequence


Sequence ID>WENV170970051
Genome IDMTKW01050301
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 16
End posion on genome 92
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctgcccatgg
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGTAGCGCGCTTGGTTCGGGACCAAGAGGTCGCAGGTTCAAA
TCCTGTCGCTCCGACCA
Downstream region at tRNA end position 
cgggaaacct
Secondary structure (Cloverleaf model)
>WENV170970051	Pro	CGG
                   g      ACCA cgggaaacct
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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