The detailed information of tRNA gene sequence


Sequence ID>WENV170970163
Genome IDMTKW01055725
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1826
End posion on genome 1736
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttctggactt
tRNA gene sequence 
GGAGGGGTGTCCGAGTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGACTCACGTAAGTGG
GCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
cggtcaatat
Secondary structure (Cloverleaf model)
>WENV170970163	Ser	TGA
                   t      GCCA cggtcaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGACTCACGTAAGTGGGCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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