The detailed information of tRNA gene sequence


Sequence ID>WENV170970260
Genome IDMTKW01058826
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 279
End posion on genome 352
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcagcaacac
tRNA gene sequence 
GGGCTCATGGTCTAGTGGTTATGACGTCTCCCTCACACGGAGGAGGTCGCCGGTTCGAAT
CCGGCTGAGCCCACtt
Downstream region at tRNA end position 
ctcttttgcc
Secondary structure (Cloverleaf model)
>WENV170970260	Val	CAC
                   c      ACtt ctcttttgcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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