The detailed information of tRNA gene sequence


Sequence ID>WENV170970265
Genome IDMTKW01059191
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1386
End posion on genome 1462
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccagagacgt
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
ttatttagga
Secondary structure (Cloverleaf model)
>WENV170970265	Met	CAT
                   t      ACCA ttatttagga
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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