The detailed information of tRNA gene sequence


Sequence ID>WENV170970289
Genome IDMTKW01060717
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 782
End posion on genome 859
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aaatcatagt
tRNA gene sequence 
GGGCCCGTAGCCTAGCCTGGATAGGGCATCAGACTCCTAATCTGAGGGTCCCGGGTTCAA
ATCCCGGCGGGTCCGCTA
Downstream region at tRNA end position 
aatcattctt
Secondary structure (Cloverleaf model)
>WENV170970289	Arg	CCT
                   t      GCTA aatcattctt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T C C G       C C G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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