The detailed information of tRNA gene sequence


Sequence ID>WENV170970466
Genome IDMTKW01071699
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1441
End posion on genome 1349
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgttcaac
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCCAAGGCGCTCGCCTGGAGAGCGAGTAAGCGGTTAGAAGCC
GCTTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aggttgcggg
Secondary structure (Cloverleaf model)
>WENV170970466	Ser	GGA
                   c      GCCA aggttgcggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      C C A        G     TAAGCGGTTAGAAGCCGCTTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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