The detailed information of tRNA gene sequence


Sequence ID>WENV170970767
Genome IDMTKW01087916
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 773
End posion on genome 860
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggaactttaa
tRNA gene sequence 
GCCGAGGTCGCATAGCTAGGATTAGTGCGCCGGACTTGAGATCCGGTTTCCCTTCGGGAT
GCGGGAGTTCAAATCTCCCCCTCGGCGCtt
Downstream region at tRNA end position 
ctttcttgtt
Secondary structure (Cloverleaf model)
>WENV170970767	Ser	TGA
                   a      GCtt ctttcttgtt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    T C G A        C      | | | | |     A
  A         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    A T T A        G     TTTCCCTTCGGGATGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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