The detailed information of tRNA gene sequence


Sequence ID>WENV170970770
Genome IDMTKW01088142
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1172
End posion on genome 1087
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtttttctag
tRNA gene sequence 
GCGGGGGTTGCCGAGCATGGTCTAAGGCGCCGGACTTAAGATCCGGTGACGCAGGTCTTC
GAGGGTTCGAATCCCTTCCCCCGCACac
Downstream region at tRNA end position 
ttttacatag
Secondary structure (Cloverleaf model)
>WENV170970770	Leu	TAA
                   g      ACac ttttacatag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
    A C G A        T      + | | | |     G
  T         G C C G       G A G G G     C
  G           | | |                 T T
  G         A G G C
    T C T A        G     TGACGCAGGTCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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