The detailed information of tRNA gene sequence


Sequence ID>WENV170970798
Genome IDMTKW01089806
Search identical group
Phylum/Class[MTKW] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 509
End posion on genome 596
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcttcata
tRNA gene sequence 
GCCGGGGTTGCTGAGCTTGGGACGGCGCGGGCCTGGAAAGCCCGTTCTCCATTGGAGTGC
ATGGGTTCAAATCCCATCCCCGGCGCTA
Downstream region at tRNA end position 
tggtgattat
Secondary structure (Cloverleaf model)
>WENV170970798	Ser	GGA
                   a      GCTA tggtgattat
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      C G A        T      | | | | |     A
    T       G T C G       A T G G G     C
    T       | + | |                 T T
    G       C G G C
      G G A        G     TTCTCCATTGGAGTGC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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