The detailed information of tRNA gene sequence


Sequence ID>WENV170970865
Genome IDMTKX01000253
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 536
End posion on genome 463
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gcaagagagc
tRNA gene sequence 
GGGCTCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCAGGAGTTCGAA
TCTCCTCGAGCCCAttg
Downstream region at tRNA end position 
ctgtttttca
Secondary structure (Cloverleaf model)
>WENV170970865	Val	GAC
                   c      Attg ctgtttttca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A G G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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