The detailed information of tRNA gene sequence


Sequence ID>WENV170970974
Genome IDMTKX01000822
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 96486
End posion on genome 96410
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccaccaatat
tRNA gene sequence 
GGCGCGGTAGTTCAGTTGGCTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
CCCCTTCCGCGTCGCCA
Downstream region at tRNA end position 
agaagagccg
Secondary structure (Cloverleaf model)
>WENV170970974	Asp	GTC
                   t      GCCA agaagagccg
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      C T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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