The detailed information of tRNA gene sequence


Sequence ID>WENV170970991
Genome IDMTKX01000878
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 27761
End posion on genome 27855
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcaacaaagc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGATCGCCTGCTAAGCGATTGTACGCCCTTTAAAG
GTGTACCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttttgtga
Secondary structure (Cloverleaf model)
>WENV170970991	Ser	GCT
                   c      GCCA ttttttgtga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G T C G       G C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACGCCCTTTAAAGGTGTACC
                    A - T
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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