The detailed information of tRNA gene sequence


Sequence ID>WENV170971397
Genome IDMTKX01004830
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1893
End posion on genome 1968
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatcgggcga
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGACT
CCCTCCTGCCCTGCAA
Downstream region at tRNA end position 
gtcaagttcc
Secondary structure (Cloverleaf model)
>WENV170971397	Trp	CCA
                   a      GCAA gtcaagttcc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T C
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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