The detailed information of tRNA gene sequence


Sequence ID>WENV170971430
Genome IDMTKX01005341
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1195
End posion on genome 1273
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttaactgcat
tRNA gene sequence 
CGGGGCGTGGCGCAGCATGGTTTAGCGCGCTTGCCTTGGGAGCAAGAGGTCGCTGGTTCA
AATCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
ttagattttt
Secondary structure (Cloverleaf model)
>WENV170971430	Pro	TGG
                   t      ACCA ttagattttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    A C G A        G      + | | | |     A
  T         C G C G       G C T G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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