The detailed information of tRNA gene sequence


Sequence ID>WENV170971835
Genome IDMTKX01013401
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1218
End posion on genome 1141
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcataagtat
tRNA gene sequence 
GTCCCCATCGTCTAGCCAGGCCCAGGACACCGGCCTTTCACGCCGGCGACAGGGGTTCAA
ATCCCCTTGGGGACGCCA
Downstream region at tRNA end position 
gaaacccccg
Secondary structure (Cloverleaf model)
>WENV170971835	Glu	TTC
                   t      GCCA gaaacccccg
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
    C C G A        C      | | | | |     A
  A         T C T G       A G G G G     C
  G         + | | |                 T T
  G         G G A C
    C C C A        A     CGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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