The detailed information of tRNA gene sequence


Sequence ID>WENV170972113
Genome IDMTKX01020214
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2321
End posion on genome 2245
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attgaaaaac
tRNA gene sequence 
GGTGCGGTAGTTCAGTTGGTTAGAATATCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCCGCACCGCAA
Downstream region at tRNA end position 
cgctcgcaaa
Secondary structure (Cloverleaf model)
>WENV170972113	Asp	GTC
                   c      GCAA cgctcgcaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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