The detailed information of tRNA gene sequence


Sequence ID>WENV170972121
Genome IDMTKX01020378
Search identical group
Phylum/Class[MTKX] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2454
End posion on genome 2378
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tatttttttg
tRNA gene sequence 
GGGGTCGTAGTTAAGTTGGTTATAACGCCGGCCTGTCACGCCGGAGGGCGTGGGTTCAAG
TCCCATCGGCCCCGCCA
Downstream region at tRNA end position 
gaaatttaag
Secondary structure (Cloverleaf model)
>WENV170972121	Asp	GTC
                   g      GCCA gaaatttaag
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     A
    T       A T T G       G T G G G     C
    G       | | | |                 T T
    G       T A A C
      T T A        G     AGGGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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