The detailed information of tRNA gene sequence


Sequence ID>WENV170972946
Genome IDMTKY01005521
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 840
End posion on genome 751
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccgcccccac
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGAAACCGTA
TCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gacaattctc
Secondary structure (Cloverleaf model)
>WENV170972946	Ser	GGA
                   c      GCCA gacaattctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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